PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007815
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 443aa    MW: 48558.5 Da    PI: 5.1559
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007815genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87.1e-31218276259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  DCAR_007815 218 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 276
                  699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.81212278IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-30216278IPR003657WRKY domain
SuperFamilySSF1182903.27E-26216278IPR003657WRKY domain
SMARTSM007741.4E-37217277IPR003657WRKY domain
PfamPF031069.3E-26219276IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MDNYHGDLTD IIRAGGGSTS GNLGTTTTTT SGGTAMTDSW QFQTDPMSFD DFGHPFSSLR  60
DPLLLADPVD MSGGSSSFFS NSNSLDQDDT AGFCGNSFIG SNLDHQHQEM KKPSSYYSRM  120
LQISPNNSNL SRDDSPVMVA SPRLLIPSST LISSSNDHMI SLNSSKAANN CLVDNTGLQI  180
SSPRNTGIKR RKSQAKKVVC IPAPTPVNSR PTGEIVPSDL WAWRKYGQKP IKGSPYPRGY  240
YRCSSSKGCS ARKQVERSRT DPNMLVITYT SEHNHPWPTQ RNALAGSTRT QPASKNSTTT  300
TASKTSTAAA SSSQNPLEVS NMKEELKENN DVDNMSTSPT KSSAVVKVEE QITDDQDKKL  360
LTEMEDPEQF TKGFPPFESY TPTLPGDSMN HIPDQDFFAE LGEIESDPLN LLFIQGFDEK  420
LESDKTLDPF TFYDWTRNTN NK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-172162781374WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002269170.11e-135PREDICTED: probable WRKY transcription factor 14
RefseqXP_015583599.11e-135PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 14
TrEMBLA0A068UWC71e-130A0A068UWC7_COFCA; Uncharacterized protein
STRINGPOPTR_0011s16050.11e-129(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.18e-76WRKY DNA-binding protein 35